Wiki source code of Community Meetings
Version 2.4 by publicadmin on 2026/01/05 09:21
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2.1 | 1 | [[image:VRE Community Meeting 2.png||data-xwiki-image-style-alignment="center" height="109" width="300"]] |
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1.1 | 2 | |
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| 4 | |||
| 5 | === Upcoming Meeting Topics === | ||
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| 7 | (% border="0" class="table-striped" style="color:#003261" %) | ||
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2.1 | 8 | |(% style="width:220px" %)tba|(% style="width:984px" %)tba |
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1.1 | 9 | |
| 10 | ---- | ||
| 11 | |||
| 12 | |||
| 13 | === How to Register === | ||
| 14 | |||
| 15 | VRE Community meetings are open to members of the research community interested in the Virtual Research Environment development. | ||
| 16 | |||
| 17 | To join the meetings: | ||
| 18 | |||
| 19 | 1. Complete the brief **[[online registration form>>https://zoom.us/meeting/register/tJErd-utqzkpHtI9rpX8cJVNSidRbM5wuMe1]]** | ||
| 20 | 1. The organizers will review and confirm your registration. | ||
| 21 | 1. You will receive an email containing the meeting link and a calendar invitation. | ||
| 22 | |||
| 23 | The information you provide is collected in accordance with the privacy policies of the [[Virtual Research Environment>>doc:Main.Privacy and Data Governance.WebHome||rel="noopener noreferrer" target="blank"]] and the third party hosting service [[Zoom US>>https://explore.zoom.us/en/privacy/||rel="noopener noreferrer" target="blank"]]. | ||
| 24 | |||
| 25 | //If you wish to unsubscribe from future communications, please cancel your registration with the link in your invitation, of from your personal Zoom account.// | ||
| 26 | |||
| 27 | |||
| 28 | === About the Meetings === | ||
| 29 | |||
| 30 | The Virtual Research Environment is a collaborative project, developed for the research community and with the research community. We want to ensure that this development is open and accessible to all clinicians and scientists at Charité, BIH, and beyond. VRE Community Meetings are organized for members of the research community to discuss their projects and use cases and for the development team to update on new features and development activities. | ||
| 31 | |||
| 32 | **When: **Alternate Fridays at 16:00-17:00 Central European Time / 09:00-10:00 Eastern Time. | ||
| 33 | |||
| 34 | **Where: **Online (Zoom meeting) | ||
| 35 | |||
| 36 | **Format:** | ||
| 37 | |||
| 38 | 1. Welcome and introduction (~~5 min) | ||
| 39 | 1. Development team updates (~~15-20 min) | ||
| 40 | 1. Main discussion topic (e.g., researcher use case presentation, in-depth feature review or demo) (~~35-40 min) | ||
| 41 | |||
| 42 | === Have questions or meeting topic suggestions? === | ||
| 43 | |||
| 44 | If you have any questions about VRE Community Meetings or would like to propose a topic for an upcoming meeting, please contact us by email: **[[vre-support@charite.de>>mailto:vre-support@charite.de]]**. | ||
| 45 | |||
| 46 | |||
| 47 | === Past Events === | ||
| 48 | |||
| 49 | (% border="1" style="margin-right:auto" %) | ||
| 50 | |=(% style="background-color: rgb(0, 50, 97); color: white; width: 82px;" %)Date|=(% style="background-color: rgb(0, 50, 97); color: white; width: 740px;" %)Discussion Topics|=(% style="background-color: rgb(0, 50, 97); color: white; width: 123px;" %)Attachments | ||
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2.2 | 51 | | | | |
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2.3 | 53 | |((( |
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2.4 | 54 | 2024-11-01 |
| 55 | )))|((( | ||
| 56 | * Use Case Synthetic MRI data & Data Protection (Tanja Schmitz-Hübsch, Neuroscience Clinical Research CenterCharité) | ||
| 57 | )))| | ||
| 58 | |((( | ||
| 59 | 2024-10-18 | ||
| 60 | )))|((( | ||
| 61 | * Transparency & Accountability in Cloud-Architectures (Dr. Ing. Elias Grünewald, Insitut für medizinische Informatik, Charité) | ||
| 62 | )))| | ||
| 63 | |((( | ||
| 64 | 2024-09-20 | ||
| 65 | )))|((( | ||
| 66 | * LLMs to support clinical research (Loreen Ruhm, Johanna Nothacker, AG von Kalle, BIH-Charité) | ||
| 67 | )))| | ||
| 68 | |((( | ||
| 69 | 2024-09-06 | ||
| 70 | )))|((( | ||
| 71 | * VRE Use Case: Patient-orientated intensive care monitoring with Philips Data Warehouse Connect System (Anne Rike Flint, Charité) | ||
| 72 | )))| | ||
| 73 | |((( | ||
| 74 | 2024-06-28 | ||
| 75 | )))|((( | ||
| 76 | * VRE Use Case ‘Chronic dynamics of electrophysiological biomarkers in dystonia patients with deep brain stimulation – a multi-center study’ - (Lucia Feldmann & Andrea Kühn, Charité) | ||
| 77 | )))| | ||
| 78 | |((( | ||
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2.3 | 79 | 2024-05-17 |
| 80 | )))|((( | ||
| 81 | * Presentation BASE4NFDI – Jana Tatscheck, Sandra Zaenkert | ||
| 82 | * Presentation & demo VRE – Michael Schirner | ||
| 83 | )))| | ||
| 84 | |((( | ||
| 85 | 2024-04-19 | ||
| 86 | )))|((( | ||
| 87 | * MedConnect Project - Martin Hoffmann & Jens Warfsmann (Fraunhofer ITEM) | ||
| 88 | * VRE Onboardng Process – Michael Schirner (Charité) | ||
| 89 | )))| | ||
| 90 | |((( | ||
| 91 | 2024-04-05 | ||
| 92 | )))|((( | ||
| 93 | * Use Case NFDI4Immuno [[https:~~/~~/www.nfdi4immuno.de/>>url:https://www.nfdi4immuno.de/]] (PD Dr. Cornelia Eckert, Charité) | ||
| 94 | * Live demo VRE – Michael Schirner (Charité, Berlin) | ||
| 95 | )))| | ||
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1.1 | 96 | |2024-03-22|((( |
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2.3 | 97 | * Sharing experience in deploying the trusted VRE at the Sahlgrenska University Hospital in Sweden - Petrus Åström and team (Sahlgrenska University Hospital and VGR, Sweden) |
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2.2 | 98 | |
| 99 | * Routine data for neuroimaging studies in critically ill and vulnerable patient groups: delirium as a use case - Florian Lammers-Lietz(Charité, Berlin) | ||
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2.1 | 100 | )))|[[attach:2024-03-22_VRE-Community_Local-deployments.mp4||rel="noopener noreferrer" target="_blank"]] |
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1.1 | 101 | |2023-09-08|VRE Demo - full functional scope ( Michael Schirner & Patrik Bey)| |
| 102 | |2023-07-14|VRE Demo + Development Update ( VRE Team ) & Use Case presentation ( Katrin Hahn ) & AlmaHealthDB ( Sabato Mellone with Marco Viceconti )| | ||
| 103 | |2023-06-30|VRE Development Update & Discoverability vie EU (ESFRI) Research Infrastructure [[EBRAINS>>httpe://.www.ebrains.eu]] (Michael Schirner, Charité Berlin)| | ||
| 104 | |2023-06-16|VRE Architecture Deep Dive (Michael Schirner, Charité Berlin)| | ||
| 105 | |2023-06-02|BIDS & Quality Control for MEG (Aaron Reer Universität Oldenburg)| | ||
| 106 | |2023-05-05|[[BSI>>https://www.bsi.bund.de/EN/Home/home_node.html]] Schutzbedarfsfeststellung & Checklists - Security requirement analysis (VRE support team, Charité Berlin)| | ||
| 107 | |2023-04-21|VRE Information Security - Demonstration of Critical-Infrastructure Audit Readiness(Michael Schirner & VRE support team, Charité Berlin)| | ||
| 108 | |2023-03-24|KIP-SDM - Show & Tell: KI in der Pflege (Daniel Fürstenau (Charité Berlin)) & [[1000Plus>>https://pubmed.ncbi.nlm.nih.gov/19995432/]] & [[LOBI>>https://biobank.charite.de/en/partners/]] (M. Temuulen & K. Vilringer)| | ||
| 109 | |2023-03-10|RDM Services at Charité: (Evgeny Bobrov & Christina Habermehl, Quest, BIH at Charité Berlin)| | ||
| 110 | |2023-02-24|De.NBI & Health-X (Martin Braun & Harald Wagener, Charité Berlin) | ||
| 111 | PREACT: A collaborative effort to predict the response to cognitive-behavioral therapy based on multimodal data (Sam Gijsen & Kerstin Ritter, Charité Berlin)| | ||
| 112 | |2023-01-27|VRE architecture: a deep dive (Michael Schirner & Marc Sacks, Charité Berlin)| | ||
| 113 | |2023-01-13|VRE demo: Overview demonstration of integrated tools and measures (Michael Schirner, Charité Berlin)| | ||
| 114 | |2022-12-15|Open discussion: Requirements and requests by upcoming use cases (VRE community)| | ||
| 115 | |2022-11-04|VRE Security: Technical and Organizational Security Measures (Michael Schirner, Charité Berlin)| | ||
| 116 | |2022-10-21|VRE workflows for brain lesion MRI processing (Patrik Bey, Charité Berlin)| | ||
| 117 | |2022-10-07|Use Case Neurosurgery (Tizian Rosenstock, Thomas Picht, Charité Berlin)| | ||
| 118 | |2022-09-23|Use Case Redcap & VRE (Uchralt Temuulen Mendel, Charité Berlin)| | ||
| 119 | |2022-09-09|Presentation of Automated Research Workflows (Dimitri Yatsenko, CEO DataJoint)| | ||
| 120 | |2022-07-01|Presentation of the Charite Data Integration Center – Medical Informatics Initiative (Professor Fabian Praßer, Dr. Peter Brunecker, Charité Berlin)| | ||
| 121 | |2022-06-03|Validation of a smart tool for neurosurgeons for risk prediction in tumor resection on an retrospective data sets of about 500 patients. (Tizian Rosenstock, Charité Berlin)| | ||
| 122 | |2022-05-06|The VRE as technological basis of EBRAINS Health Data Cloud (Michael Schirner, Charité Berlin)| | ||
| 123 | |2022-04-22|Imaging standards and de-identification procedures (Igori Comarovschii, Karolinska Institutet)| | ||
| 124 | |2022-04-08|[[NWB>>https://www.nwb.org/nwb-neurophysiology/]] - Standard animal data for VRE in CRC (Retune) (Philip Tovote, Universität Würzburg)| | ||
| 125 | |2022-03-25|ELN - Finder (Birte Lindstädt, ZB MED)| | ||
| 126 | |2022-03-11|EPIC Project: uploading and organizing large datasets in the VRE including imaging and REDCap data (Philipp Böhm-Sturm and Jan Focke, Charite)| | ||
| 127 | |2022-02-25|Clinical research data management @NCRC (Christina Habermehl, Evgeny Bobrov and Rene Bernard, Charite)| | ||
| 128 | |2022-02-11|PACS download and VRE Risk report (Mendel Temuulen, Charité)| | ||
| 129 | |2022-01-28|Secure public sharing of a BIDS dataset - a new VRE use case (Jonathan Vanhoecke and Julian Neumann, Charité)| | ||
| 130 | |2021-12-17|[[RSpace>>https://www.researchspace.com/]]: The next generation eLab Notebook: Follow up demonstration and discussion (by Rory Macneil and team, RSpace)| | ||
| 131 | |2021-12-03|No meeting| | ||
| 132 | |2021-11-19|Phoenix PACS Integration workflows and use cases (Indoc & Charite teams, Jonathan Vanhoecke (Retune), DeepMS team)| | ||
| 133 | |2021-11-05|ResearchSpace (Rory Macneil and team, Rspace)| | ||
| 134 | |2021-10-22|NFDI Neuroscience (Petra Ritter, Charité )| | ||
| 135 | |2021-10-08|PACS integration (Paul Pawletta, Franziska Fritz, Jonathan VanHoecke, Julian Neumann (Charité) , Indoc team)| | ||
| 136 | |2021-09-24|DataShield (Emanuel Schwarz)| | ||
| 137 | |2021-09-17|No meeting| | ||
| 138 | |2021-09-10|No meeting| | ||
| 139 | |2021-08-27|DPIA presentation (Petra Ritter, Charité)| | ||
| 140 | |2021-08-13|Demo of Release 1.4 VRE features (Indoc Team)| | ||
| 141 | |2021-07-30|Cross-disease biobank data management (Nicolas Weider, Charité)| | ||
| 142 | |2021-07-16|VRE Feature Development - Datasets (Indoc Team)| | ||
| 143 | |2021-07-09|No meeting| | ||
| 144 | |2021-07-02|No meeting| | ||
| 145 | |2021-06-25|VRE Phase I Retrospective (Indoc Team)| | ||
| 146 | |2021-06-18|Ontologies and standards - OpenMINDS and BIDS (Micha Schirner and Paul Pawletta, Charité )| | ||
| 147 | |2021-06-11|No meeting| | ||
| 148 | |2021-06-04|AI Mind (Ira Haraldsen and team, Oslo University Hospital)| | ||
| 149 | |2021-05-28|Infrastructure for analysis of cancer genomes at BIH (Sven Twardziok, BIH Centre for Digital Health)| | ||
| 150 | |2021-05-21|CORD-MI - German Medical Informatics Initiative (Josef Schepers-Fischer)| | ||
| 151 | |2021-05-14|No meeting| | ||
| 152 | |2021-05-07|VRE Demonstration and User Feedback (Indoc)| | ||
| 153 | |2021-04-30|Research Data Management at the Charité (Angela Ariza, BUA-FDM project)| | ||
| 154 | |2021-04-23|LabFolder overview (Ingo Przesdzing)| | ||
| 155 | |2021-04-16|VRE Workbench Tools - overview and feedback (Indoc Team)| | ||
| 156 | |2021-04-09|CRC Cardio/HfpEF Consortium “Multilevel mechanistic characterization of heart failure with preserved ejection fraction” (Burkhardt Pieske, Mitch Gotthardt, Sofia Forslund, Diana Bachran)| | ||
| 157 | |2021-04-02|No meeting| | ||
| 158 | |2021-03-26|EPIC Animal imaging - REDCap requirements; DIAL MS Research Program (Philipp Böhm-Sturm and Alexander Brandt, Charité)| | ||
| 159 | |2020-08-14|RETUNE & Animal imaging Use Cases: project overview (Petra Ritter, Andrea Kühn, Philpp Böhm-Sturm, Markus Aswendt - Charité)| | ||
| 160 | |2020-08-07|VRE Infrastructure setup; COVID-19 neuroimaging project (Petra Ritter, Michael Kramer, Fabian Prasser - Charité)| | ||
| 161 | |2020-07-31|VRE Governance (Petra Ritter, Andrea Frank - Charité )| | ||
| 162 | |2020-07-24|User Registration Workflow, Green Room Infrastructure (Petra Ritter, Michael Kramer)| | ||
| 163 | |2020-07-17|Green Room Infrastructure setup and initial data ingestion (Petra Ritter, Peter Brunecker)| | ||
| 164 | |2020-07-10|General Quartlery Update (Petra Ritter, Peter Brunecker)| | ||
| 165 | |2020-07-03|DeepMS+ Use Case: user stories and data flow (Claudia Chien, Kerstin Ritter, Petra Ritter)| | ||
| 166 | |2020-06-26|VRE and HPC integration (Georgios Nikolis, Peter Brunecker, Petra Ritter)| | ||
| 167 | |2020-06-19|BeLOVE Use Case: project overview (Petra Ritter, Peter Brunecker, Joachim Weber)| | ||
| 168 | |2020-06-12|VRE and HDP Hadoop integration, Part 2 (Peter Brunecker, Marcel Fisser)| | ||
| 169 | |2020-06-05|VRE and HDP Hadoop integration, Part 1 (Peter Brunecker, Marcel Fisser)| | ||
| 170 | |2020-05-29|VBC Use Case: user stories and data flow, Part 4 - Workbench, Research Portal (cont’d) (Petra Ritter)| | ||
| 171 | |2020-05-22|VBC Use Case: user stories and data flow, Part 3 - Workbench, Research Portal (Petra Ritter)| | ||
| 172 | |2020-05-15|VBC Use Case: user stories and data flow, Part 2 - Metadata capture, Data warehousing (Petra Ritter)| | ||
| 173 | |2020-05-11|VBC Use Case: user stories and data flow, Part 1 - Green Room, VRE Staging (Petra Ritter)| | ||
| 174 | |2020-04-24|DeepMS+ Use Case: overview (Claudia Chien, Kerstin Ritter, Petra Ritter)| |