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Last modified by publicadmin on 2026/04/09 12:02
From version 4.1
edited by publicadmin
on 2026/04/08 06:48
Change comment: Imported from XAR
To version 1.1
edited by publicadmin
on 2025/12/16 12:57
Change comment: Install extension [org.xwiki.platform:xwiki-platform-distribution-flavor-common/16.10.14]

Summary

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1 -Guides and Documentation (editable draft versions)
1 +Home
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2 -The goal of the VRE is to make it easier for researchers to** find and securely access data **and use it in innovative ways.
1 +== Welcome to your wiki ==
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5 -The VRE Public Wiki contains learning resources for current and future VRE Users, as well as information for researchers and programs that are interested in learning more about the VRE. 
3 +XWiki is the best tool to organize your knowledge. A //wiki// is organized in a hierarchy of //pages//. You can create multiple wikis, each with its own set of pages.
6 6  
7 -== Getting Started ==
5 +XWiki can be used as a knowledge base (support, documentation, sales, etc.), for collaborative workspaces or even as a complete intranet.
8 8  
9 -* To log into your VRE account navigate to: [[https:~~/~~/vre.charite.de>>https://vre.charite.de]]  
10 -* Visit the BIH website to learn about VRE as a module of the [[Charité Health Data Platform>>https://www.bihealth.org/en/translation/network/digital-medicine/bihcharite-virtual-research-environment/virtual-research-environment-architecture]] 
11 -* Check out the instructions on how to [[register a user account>>doc:.user_guide.Accessing the VRE.Registering a User Account.WebHome]] or [[request a Project>>doc:.user_guide.Accessing the VRE.Requesting a Project]]. 
12 -* Learn about the VRE's [[Governance and Data Protection>>doc:.Privacy and Data Governance.WebHome]] policies
7 +== The basics ==
13 13  
14 -Once your account has been set up and your access granted, check out how to [[navigate the Project canvas>>doc:.user_guide.Navigating the Project Canvas.WebHome]] and [[manage your data>>doc:.user_guide.Managing Data.WebHome]].  You can learn how to [[store>>doc:.user_guide.Managing Data.File Upload.WebHome]], [[process>>doc:.user_guide.Managing Data.File Processing.WebHome]], and [[analyze>>doc:.user_guide.Analyzing Data.WebHome]] your data, as well as how to share it with other [[members of your team>>doc:.user_guide.Managing User Accounts.User Roles.WebHome]]. 
9 +To make the most out of your wiki, log-in and:
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11 +Use the {{displayIcon name="pencil"/}} button above to //edit// this page and start customizing your wiki to your needs.
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22 - 📖​ ​​​​​ **[[VRE User Guide>>doc:.user_guide.WebHome]]**
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13 +Use the {{displayIcon name="add"/}} button above to //add// more pages to your wiki and create the //hierarchy// that best organizes your content.
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15 +Use the {{displayIcon name="home"/}} breadcrumbs located above the title to //navigate// inside your pages. It's easy to get lost in a big wiki without them.
29 29  
30 -If you are stuck or need help, check out [[Getting Help>>doc:.user_guide.Getting Help]] or reach out to the team directly at [[vre-support@charite.de>>mailto:vre-support@charite.de]]. 
17 +You can also use the [[Sandbox>>Sandbox.WebHome]] for more demo content and generally a place to experiment with your wiki's features.
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19 + {{box}}Learn more on how to use XWiki with the [[Getting Started Guide>>https://www.xwiki.org/xwiki/bin/view/Documentation/UserGuide/GettingStarted/WebHome]].{{/box}}
32 32  
33 -== Next Steps ==
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24 +(((
25 +== Extend your wiki ==
34 34  
35 -If you've got the basics down and you're looking for more advanced features, check out some of the additional guides below:
27 +To extend the power and functionalities of your wiki with the features that //you// need, head over to the [[Extension Manager>>XWiki.XWikiPreferences||queryString="editor=globaladmin&section=XWiki.Extensions"]] where you can search for and install extensions.
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42 - ​ 🎛 ​​​​​ **[[System Admin Guide>>doc:.user_guide.WebHome]]**
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48 - 🔩​ ​​​​​**[[Platform Administrator Guide>>doc:.platform_admin_tools.WebHome]]**
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54 - 💻​ ​​​​​**[[VRE Developer Guide>>doc:.user_guide.WebHome]]**
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29 +To browse through the 900+ community contributed extensions available for XWiki, head over to the [[Extensions Repository>>https://extensions.xwiki.org]].
56 56  )))
57 57  
58 -==== **Ready to Get Started? ** [[[[image:1635454266203-985.png]]>>https://vre-staging.indocresearch.org/vre/pages/getting_started]] ====
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33 +(((
34 +== Create your application ==
59 59  
60 -=== Portal Demo Video ===
36 +Go beyond the available extensions and define the //structure// of your data based on //your// needs, creating //your// own applications with [[App Within Minutes>>AppWithinMinutes]] (AWM).
61 61  
62 -{{video width="75%" height="200px" attachment="VRE-Portal-Demo 0-3-3 2021-01-17.mp4" ratio="16:9"/}}
63 -
64 -== ==
65 -
66 -==== Additional Demo Videos: ====
67 -
68 -* (((
69 -VRE Portal Demonstration – January 2021
38 +AWM will take care of making it easy for you and your users to create and manage the data.
70 70  )))
71 -* (((
72 -How to use VRE Workbench Tools
73 73  )))
74 -* (((
75 -How to use Virtual Desktop Applications with the VRE
76 -)))
77 -* (((
78 -How to use Jupyter workbench to process data in the VRE
79 -)))
80 -
81 -== Additional Information ==
82 -
83 -To learn more about the BIH/Charité Virtual Research Environment check out the BIH website: [[https:~~/~~/www.bihealth.org/en/network/digital-medicine/bihcharite-virtual-research-environment>>https://www.bihealth.org/en/network/digital-medicine/bihcharite-virtual-research-environment]]
84 -
85 -For more information or to find out about how to access the VRE please contact [[vre-support@charite.de>>path:javascript:linkTo_UnCryptMailto(%27ocknvq%2Cxtg%5C%2FuwrrqtvBejctkvg0fg%27);]]. 
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94 -Copyright © 2022, Indoc Research. This work is licensed under a [[Creative Commons Attribution-ShareAlike 4.0>>http://creativecommons.org/licenses/by-sa/4.0/ ||rel="noopener noreferrer" target="blank"]] International License.
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